Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSSC4Q9Y5U2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 AL499627.1-201ENST00000569373 2188 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 CCS-201ENST00000310190 942 ntTSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 KRT18P65-201ENST00000439811 1286 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 MTCL1P1-201ENST00000446207 792 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 ANO7L1-203ENST00000602586 1720 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 LINC00602-201ENST00000629776 2065 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
TSSC4Q9Y5U2 AL356309.3-201ENST00000624132 1934 ntBASIC14□□□□□ -0.17
TSSC4Q9Y5U2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TNRC18P3-201ENST00000441896 2691 ntBASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 AC099398.1-201ENST00000567919 2776 ntBASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TSSC4Q9Y5U2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms