Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 AC079602.3-201ENST00000623931 403 ntBASIC20.05■□□□□ 0.8
PUF60Q9UHX1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PUF60Q9UHX1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 HEIH-201ENST00000623091 1652 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 AL391807.1-203ENST00000604392 2365 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 MIR662-201ENST00000384847 95 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 AC246785.2-201ENST00000432512 513 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 LINC01711-201ENST00000598340 967 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 KRT8P32-201ENST00000512863 1461 ntBASIC20.04■□□□□ 0.8
PUF60Q9UHX1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PUF60Q9UHX1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PUF60Q9UHX1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 KRT8P7-201ENST00000533003 1432 ntBASIC20.02■□□□□ 0.8
PUF60Q9UHX1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 FDX1P1-201ENST00000449115 551 ntBASIC20.02■□□□□ 0.8
PUF60Q9UHX1 KRT17P6-201ENST00000453795 1220 ntBASIC20.02■□□□□ 0.8
PUF60Q9UHX1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PUF60Q9UHX1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PUF60Q9UHX1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PUF60Q9UHX1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PUF60Q9UHX1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms