Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHB16Q9NRJ7 AC103702.1-201ENST00000548801 2630 ntBASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 KRT18P23-201ENST00000435622 1283 ntBASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CCR12P-201ENST00000446203 998 ntBASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 AC134043.2-201ENST00000624206 2238 ntBASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHB16Q9NRJ7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 PHGDH-209ENST00000641074 1780 ntBASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 AC008687.5-201ENST00000593746 558 ntBASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB16Q9NRJ7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHB16Q9NRJ7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms