Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCG3Q8WXD2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 GMCL1P1-201ENST00000463439 1581 ntBASIC18.33■□□□□ 0.52
SCG3Q8WXD2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCG3Q8WXD2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
SCG3Q8WXD2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 AC084018.2-201ENST00000613093 2607 ntBASIC18.32■□□□□ 0.52
SCG3Q8WXD2 HBZP1-201ENST00000354915 429 ntBASIC18.32■□□□□ 0.52
SCG3Q8WXD2 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCG3Q8WXD2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 KRT18P48-201ENST00000434763 852 ntBASIC18.31■□□□□ 0.52
SCG3Q8WXD2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 HCG4P8-203ENST00000443049 980 ntBASIC18.31■□□□□ 0.52
SCG3Q8WXD2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG3Q8WXD2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms