Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 AC069335.1-201ENST00000489972 472 ntBASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 MIR4525-201ENST00000580000 75 ntBASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRUNE2Q8WUY3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 TREML5P-201ENST00000421694 576 ntBASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 AC097493.3-201ENST00000509725 367 ntBASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 AL805961.1-202ENST00000641562 540 ntBASIC18.52■□□□□ 0.56
PRUNE2Q8WUY3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PRUNE2Q8WUY3 AL049757.1-201ENST00000616842 1596 ntBASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 KRT18P32-201ENST00000424695 1287 ntBASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 ACA64.2-201ENST00000459014 129 ntBASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 GPS2P2-201ENST00000430745 888 ntBASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRUNE2Q8WUY3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 AC012676.1-201ENST00000574705 1949 ntBASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
PRUNE2Q8WUY3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 KRT18P65-201ENST00000439811 1286 ntBASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 KRT8P48-201ENST00000515599 1220 ntBASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRUNE2Q8WUY3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRUNE2Q8WUY3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms