Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 AC027612.4-201ENST00000605371 583 ntBASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 AC010507.1-201ENST00000633895 436 ntBASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 AC018445.3-201ENST00000624177 1945 ntBASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KLHDC9Q8NEP7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KLHDC9Q8NEP7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.58■□□□□ 0.73
KLHDC9Q8NEP7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 KRT19P2-202ENST00000557173 1012 ntBASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 AC109462.3-201ENST00000573934 613 ntBASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 STK25P1-201ENST00000585406 838 ntBASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
KLHDC9Q8NEP7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 AP002414.1-201ENST00000391405 1147 ntBASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KLHDC9Q8NEP7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 BCAR1-209ENST00000546196 1340 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms