Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19■□□□□ 0.63
TTC39CQ8N584 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TTC39CQ8N584 AC005336.2-201ENST00000593183 939 ntBASIC19■□□□□ 0.63
TTC39CQ8N584 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
TTC39CQ8N584 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19■□□□□ 0.63
TTC39CQ8N584 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TTC39CQ8N584 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19■□□□□ 0.63
TTC39CQ8N584 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC39CQ8N584 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 POM121L3P-201ENST00000419331 1163 ntBASIC18.99■□□□□ 0.63
TTC39CQ8N584 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 IGHV3-47-201ENST00000425060 335 ntBASIC18.99■□□□□ 0.63
TTC39CQ8N584 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 MINOS1P3-201ENST00000457048 203 ntBASIC18.99■□□□□ 0.63
TTC39CQ8N584 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TTC39CQ8N584 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39CQ8N584 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 AC006116.8-202ENST00000587620 1550 ntBASIC18.98■□□□□ 0.63
TTC39CQ8N584 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 NOC2LP2-201ENST00000407594 1944 ntBASIC18.98■□□□□ 0.63
TTC39CQ8N584 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 COX5BP2-201ENST00000392354 334 ntBASIC18.98■□□□□ 0.63
TTC39CQ8N584 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 AC122714.2-201ENST00000502787 707 ntBASIC18.98■□□□□ 0.63
TTC39CQ8N584 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 AP000867.3-201ENST00000524675 377 ntBASIC18.98■□□□□ 0.63
TTC39CQ8N584 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39CQ8N584 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39CQ8N584 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 AC009949.1-201ENST00000623048 1830 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 NSUN5P1-202ENST00000421140 1535 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 NSUN5P2-203ENST00000457352 1529 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 FAM220CP-201ENST00000395253 831 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 HCG4P8-203ENST00000443049 980 ntBASIC18.97■□□□□ 0.63
TTC39CQ8N584 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC39CQ8N584 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39CQ8N584 AC074051.2-201ENST00000565115 352 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms