Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.66■□□□□ 0.74
NME8Q8N427 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.66■□□□□ 0.74
NME8Q8N427 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NME8Q8N427 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NME8Q8N427 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NME8Q8N427 MIR574-201ENST00000385209 96 ntBASIC19.65■□□□□ 0.74
NME8Q8N427 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.65■□□□□ 0.74
NME8Q8N427 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
NME8Q8N427 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.65■□□□□ 0.74
NME8Q8N427 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NME8Q8N427 AL671883.3-201ENST00000603274 991 ntBASIC19.65■□□□□ 0.74
NME8Q8N427 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NME8Q8N427 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.65■□□□□ 0.74
NME8Q8N427 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.65■□□□□ 0.74
NME8Q8N427 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NME8Q8N427 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NME8Q8N427 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NME8Q8N427 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NME8Q8N427 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.64■□□□□ 0.74
NME8Q8N427 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NME8Q8N427 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NME8Q8N427 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NME8Q8N427 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NME8Q8N427 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.64■□□□□ 0.73
NME8Q8N427 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NME8Q8N427 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NME8Q8N427 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 AC106730.1-201ENST00000566722 1090 ntBASIC19.64■□□□□ 0.73
NME8Q8N427 AC243591.1-201ENST00000452967 1364 ntBASIC19.64■□□□□ 0.73
NME8Q8N427 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.64■□□□□ 0.73
NME8Q8N427 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NME8Q8N427 TNXA-203ENST00000507684 2038 ntBASIC19.64■□□□□ 0.73
NME8Q8N427 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.64■□□□□ 0.73
NME8Q8N427 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.64■□□□□ 0.73
NME8Q8N427 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.64■□□□□ 0.73
NME8Q8N427 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.64■□□□□ 0.73
NME8Q8N427 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NME8Q8N427 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NME8Q8N427 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NME8Q8N427 AL049840.3-201ENST00000602669 611 ntBASIC19.63■□□□□ 0.73
NME8Q8N427 MIR7706-201ENST00000613747 67 ntBASIC19.63■□□□□ 0.73
NME8Q8N427 AC023511.2-201ENST00000618803 211 ntBASIC19.63■□□□□ 0.73
NME8Q8N427 AC116407.3-201ENST00000623905 1129 ntBASIC19.63■□□□□ 0.73
NME8Q8N427 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NME8Q8N427 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 AC090340.1-201ENST00000620778 4980 ntBASIC19.63■□□□□ 0.73
NME8Q8N427 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NME8Q8N427 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NME8Q8N427 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NME8Q8N427 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms