Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AC105036.2-201ENST00000569468 176 ntBASIC14.89□□□□□ -0.03
ZNF546Q86UE3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 HTR7P1-201ENST00000538670 1336 ntBASIC14.89□□□□□ -0.03
ZNF546Q86UE3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF546Q86UE3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 AC026691.1-201ENST00000602502 2017 ntBASIC14.88□□□□□ -0.03
ZNF546Q86UE3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF546Q86UE3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
ZNF546Q86UE3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms