Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AL138831.2-201ENST00000606564 490 ntBASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AC022898.2-201ENST00000616822 1312 ntBASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 KRT8P47-201ENST00000604727 1398 ntBASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 AC125634.1-201ENST00000438758 1403 ntBASIC16.36■□□□□ 0.21
PRAMEF20Q5VT98 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TP73-AS1-210ENST00000637775 1455 ntBASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC100803.2-201ENST00000562459 1963 ntBASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AC114341.1-201ENST00000618070 349 ntBASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEF20Q5VT98 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEF20Q5VT98 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms