Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
USH1GQ495M9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.48■□□□□ 0.87
USH1GQ495M9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 FAM220CP-201ENST00000395253 831 ntBASIC20.48■□□□□ 0.87
USH1GQ495M9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 FGFR3P6-201ENST00000457012 610 ntBASIC20.48■□□□□ 0.87
USH1GQ495M9 AC106795.1-205ENST00000512851 1056 ntBASIC20.48■□□□□ 0.87
USH1GQ495M9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
USH1GQ495M9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.48■□□□□ 0.87
USH1GQ495M9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 AC097374.2-201ENST00000618617 1306 ntBASIC20.48■□□□□ 0.87
USH1GQ495M9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.48■□□□□ 0.87
USH1GQ495M9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USH1GQ495M9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 HCG11-201ENST00000411553 5696 ntBASIC20.47■□□□□ 0.87
USH1GQ495M9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 AC096633.1-201ENST00000422446 749 ntBASIC20.47■□□□□ 0.87
USH1GQ495M9 ABCD1P5-201ENST00000445663 754 ntBASIC20.47■□□□□ 0.87
USH1GQ495M9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
USH1GQ495M9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.47■□□□□ 0.87
USH1GQ495M9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.47■□□□□ 0.87
USH1GQ495M9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.47■□□□□ 0.87
USH1GQ495M9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.47■□□□□ 0.87
USH1GQ495M9 AC148477.8-201ENST00000624298 468 ntBASIC20.47■□□□□ 0.87
USH1GQ495M9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USH1GQ495M9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.46■□□□□ 0.87
USH1GQ495M9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USH1GQ495M9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.46■□□□□ 0.87
USH1GQ495M9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.46■□□□□ 0.87
USH1GQ495M9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 AP005117.1-201ENST00000584346 1413 ntBASIC20.46■□□□□ 0.87
USH1GQ495M9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 RBM17P3-201ENST00000417687 1192 ntBASIC20.46■□□□□ 0.87
USH1GQ495M9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.46■□□□□ 0.87
USH1GQ495M9 AL662844.1-201ENST00000546340 181 ntBASIC20.46■□□□□ 0.87
USH1GQ495M9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.46■□□□□ 0.87
USH1GQ495M9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.46■□□□□ 0.87
USH1GQ495M9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 HLA-A-201ENST00000376802 1334 ntBASIC20.46■□□□□ 0.87
USH1GQ495M9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.46■□□□□ 0.87
USH1GQ495M9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USH1GQ495M9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.46■□□□□ 0.87
USH1GQ495M9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
USH1GQ495M9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.45■□□□□ 0.87
USH1GQ495M9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms