Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE4BQ07343 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE4BQ07343 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE4BQ07343 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PDE4BQ07343 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 AL354751.1-201ENST00000412768 1863 ntBASIC21.11■□□□□ 0.97
PDE4BQ07343 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE4BQ07343 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 AC005332.8-201ENST00000622750 2735 ntBASIC21.11■□□□□ 0.97
PDE4BQ07343 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDE4BQ07343 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PDE4BQ07343 AC096633.1-201ENST00000422446 749 ntBASIC21.11■□□□□ 0.97
PDE4BQ07343 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE4BQ07343 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.11■□□□□ 0.97
PDE4BQ07343 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE4BQ07343 ABALON-201ENST00000629058 1903 ntBASIC21.11■□□□□ 0.97
PDE4BQ07343 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
PDE4BQ07343 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE4BQ07343 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PDE4BQ07343 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE4BQ07343 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE4BQ07343 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 FLJ13224-201ENST00000313737 1514 ntBASIC21.1■□□□□ 0.97
PDE4BQ07343 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE4BQ07343 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 AP000997.3-201ENST00000623333 2250 ntBASIC21.1■□□□□ 0.97
PDE4BQ07343 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE4BQ07343 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.1■□□□□ 0.97
PDE4BQ07343 AL121894.2-201ENST00000602977 491 ntBASIC21.1■□□□□ 0.97
PDE4BQ07343 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 AL133373.2-201ENST00000623187 2828 ntBASIC21.1■□□□□ 0.97
PDE4BQ07343 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.1■□□□□ 0.97
PDE4BQ07343 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDE4BQ07343 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE4BQ07343 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE4BQ07343 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDE4BQ07343 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PDE4BQ07343 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 FAAHP1-202ENST00000446499 1238 ntBASIC21.09■□□□□ 0.97
PDE4BQ07343 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.09■□□□□ 0.97
PDE4BQ07343 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.09■□□□□ 0.97
PDE4BQ07343 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.09■□□□□ 0.97
PDE4BQ07343 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.09■□□□□ 0.97
PDE4BQ07343 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 INTS4P1-201ENST00000438455 1935 ntBASIC21.09■□□□□ 0.97
PDE4BQ07343 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.09■□□□□ 0.97
PDE4BQ07343 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PDE4BQ07343 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDE4BQ07343 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms