Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 AC090164.3-201ENST00000610780 2143 ntBASIC18.79■□□□□ 0.6
USP46P62068 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP46P62068 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.78■□□□□ 0.6
USP46P62068 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.78■□□□□ 0.6
USP46P62068 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 AP002469.2-201ENST00000531724 424 ntBASIC18.78■□□□□ 0.6
USP46P62068 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.78■□□□□ 0.6
USP46P62068 AC011467.2-201ENST00000598425 242 ntBASIC18.78■□□□□ 0.6
USP46P62068 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.78■□□□□ 0.6
USP46P62068 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP46P62068 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
USP46P62068 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP46P62068 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.78■□□□□ 0.6
USP46P62068 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
USP46P62068 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP46P62068 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.77■□□□□ 0.6
USP46P62068 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.77■□□□□ 0.6
USP46P62068 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP46P62068 DUTP2-201ENST00000519164 463 ntBASIC18.77■□□□□ 0.6
USP46P62068 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP46P62068 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.77■□□□□ 0.6
USP46P62068 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.77■□□□□ 0.6
USP46P62068 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 TP73-AS1-207ENST00000624167 988 ntBASIC18.77■□□□□ 0.6
USP46P62068 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.77■□□□□ 0.6
USP46P62068 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
USP46P62068 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
USP46P62068 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP46P62068 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP46P62068 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
USP46P62068 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP46P62068 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP46P62068 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP46P62068 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP46P62068 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 MRPL3P1-201ENST00000400109 1033 ntBASIC18.76■□□□□ 0.59
USP46P62068 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.76■□□□□ 0.59
USP46P62068 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.76■□□□□ 0.59
USP46P62068 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.76■□□□□ 0.59
USP46P62068 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 REXO1L9P-201ENST00000604264 2108 ntBASIC18.76■□□□□ 0.59
USP46P62068 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP46P62068 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.75■□□□□ 0.59
USP46P62068 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.75■□□□□ 0.59
USP46P62068 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.75■□□□□ 0.59
USP46P62068 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.75■□□□□ 0.59
USP46P62068 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
USP46P62068 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP46P62068 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.75■□□□□ 0.59
USP46P62068 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms