Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.12■□□□□ 0.49
HLA-FP30511 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-FP30511 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-FP30511 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-FP30511 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HLA-FP30511 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-FP30511 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-FP30511 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 BX640515.1-201ENST00000617215 977 ntBASIC18.11■□□□□ 0.49
HLA-FP30511 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-FP30511 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-FP30511 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 AC009949.1-201ENST00000623048 1830 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-FP30511 AL590627.1-203ENST00000421194 1026 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 NKAPP1-205ENST00000585790 367 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 AC120114.3-201ENST00000611923 658 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 MIR7706-201ENST00000613747 67 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-FP30511 AL139288.1-201ENST00000623748 933 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 FAM215A-202ENST00000632077 792 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.1■□□□□ 0.49
HLA-FP30511 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HLA-FP30511 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-FP30511 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HLA-FP30511 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-FP30511 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HLA-FP30511 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-FP30511 SIRPAP1-201ENST00000448467 1770 ntBASIC18.09■□□□□ 0.49
HLA-FP30511 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HLA-FP30511 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HLA-FP30511 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HLA-FP30511 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-FP30511 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HLA-FP30511 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-FP30511 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms