Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINGO3P0C6S8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINGO3P0C6S8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINGO3P0C6S8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINGO3P0C6S8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINGO3P0C6S8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.35■□□□□ 0.37
LINGO3P0C6S8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 FAM207BP-201ENST00000447172 505 ntBASIC17.35■□□□□ 0.37
LINGO3P0C6S8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 AP000692.2-201ENST00000608391 879 ntBASIC17.35■□□□□ 0.37
LINGO3P0C6S8 DGCR10-201ENST00000609839 495 ntBASIC17.35■□□□□ 0.37
LINGO3P0C6S8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINGO3P0C6S8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINGO3P0C6S8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
LINGO3P0C6S8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.33■□□□□ 0.36
LINGO3P0C6S8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINGO3P0C6S8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms