Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 KRT18P58-201ENST00000527480 1120 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A2P08123 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 AC023511.2-201ENST00000618803 211 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL1A2P08123 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A2P08123 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COL1A2P08123 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL1A2P08123 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A2P08123 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A2P08123 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A2P08123 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.53■□□□□ 0.72
COL1A2P08123 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL1A2P08123 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.53■□□□□ 0.72
COL1A2P08123 AC006557.2-201ENST00000592985 1240 ntBASIC19.53■□□□□ 0.72
COL1A2P08123 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
COL1A2P08123 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 ZNF259P1-201ENST00000407656 1365 ntBASIC19.53■□□□□ 0.72
COL1A2P08123 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A2P08123 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.52■□□□□ 0.72
COL1A2P08123 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.52■□□□□ 0.72
COL1A2P08123 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
COL1A2P08123 AC092910.1-201ENST00000482027 1129 ntBASIC19.52■□□□□ 0.72
COL1A2P08123 AC002558.1-201ENST00000488906 803 ntBASIC19.52■□□□□ 0.72
COL1A2P08123 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.52■□□□□ 0.72
COL1A2P08123 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.52■□□□□ 0.72
COL1A2P08123 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.52■□□□□ 0.72
COL1A2P08123 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL1A2P08123 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.52■□□□□ 0.71
COL1A2P08123 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COL1A2P08123 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 KRT18P27-201ENST00000427733 1299 ntBASIC19.51■□□□□ 0.71
COL1A2P08123 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.51■□□□□ 0.71
COL1A2P08123 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.51■□□□□ 0.71
COL1A2P08123 AC109462.3-201ENST00000573934 613 ntBASIC19.51■□□□□ 0.71
COL1A2P08123 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.51■□□□□ 0.71
COL1A2P08123 AL589182.2-201ENST00000619332 1049 ntBASIC19.51■□□□□ 0.71
COL1A2P08123 AC117500.6-201ENST00000624871 588 ntBASIC19.51■□□□□ 0.71
COL1A2P08123 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.51■□□□□ 0.71
COL1A2P08123 AP000997.3-201ENST00000623333 2250 ntBASIC19.51■□□□□ 0.71
COL1A2P08123 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.51■□□□□ 0.71
COL1A2P08123 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL1A2P08123 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL1A2P08123 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A2P08123 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A2P08123 AL020996.1-203ENST00000536896 2307 ntBASIC19.5■□□□□ 0.71
COL1A2P08123 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A2P08123 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COL1A2P08123 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.5■□□□□ 0.71
COL1A2P08123 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.5■□□□□ 0.71
COL1A2P08123 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.5■□□□□ 0.71
COL1A2P08123 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.5■□□□□ 0.71
COL1A2P08123 STK25P1-201ENST00000585406 838 ntBASIC19.5■□□□□ 0.71
COL1A2P08123 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.5■□□□□ 0.71
COL1A2P08123 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
COL1A2P08123 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.5■□□□□ 0.71
COL1A2P08123 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms