Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TSPAN3O60637 FDX1P1-201ENST00000449115 551 ntBASIC18.42■□□□□ 0.54
TSPAN3O60637 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.42■□□□□ 0.54
TSPAN3O60637 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TSPAN3O60637 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN3O60637 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN3O60637 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TSPAN3O60637 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN3O60637 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 AF238378.1-201ENST00000526806 358 ntBASIC18.41■□□□□ 0.54
TSPAN3O60637 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.41■□□□□ 0.54
TSPAN3O60637 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.41■□□□□ 0.54
TSPAN3O60637 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN3O60637 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 AC022898.2-201ENST00000616822 1312 ntBASIC18.41■□□□□ 0.54
TSPAN3O60637 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.41■□□□□ 0.54
TSPAN3O60637 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN3O60637 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.41■□□□□ 0.54
TSPAN3O60637 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TSPAN3O60637 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.4■□□□□ 0.54
TSPAN3O60637 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
TSPAN3O60637 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.4■□□□□ 0.54
TSPAN3O60637 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.4■□□□□ 0.54
TSPAN3O60637 DUTP2-201ENST00000519164 463 ntBASIC18.4■□□□□ 0.54
TSPAN3O60637 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TSPAN3O60637 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.4■□□□□ 0.54
TSPAN3O60637 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
TSPAN3O60637 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TSPAN3O60637 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.4■□□□□ 0.54
TSPAN3O60637 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.4■□□□□ 0.54
TSPAN3O60637 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TSPAN3O60637 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
TSPAN3O60637 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms