Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.47■□□□□ 0.39
PEX1O43933 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PEX1O43933 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PEX1O43933 KRT8P11-201ENST00000409686 1436 ntBASIC17.47■□□□□ 0.39
PEX1O43933 AC112777.1-201ENST00000540175 1423 ntBASIC17.47■□□□□ 0.39
PEX1O43933 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PEX1O43933 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
PEX1O43933 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PEX1O43933 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.46■□□□□ 0.39
PEX1O43933 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.46■□□□□ 0.39
PEX1O43933 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 AC006116.8-202ENST00000587620 1550 ntBASIC17.46■□□□□ 0.39
PEX1O43933 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 ARMC10P1-201ENST00000313754 855 ntBASIC17.46■□□□□ 0.39
PEX1O43933 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.46■□□□□ 0.39
PEX1O43933 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 KRT18P35-201ENST00000510488 1269 ntBASIC17.46■□□□□ 0.39
PEX1O43933 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.46■□□□□ 0.39
PEX1O43933 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.46■□□□□ 0.39
PEX1O43933 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PEX1O43933 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PEX1O43933 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.46■□□□□ 0.39
PEX1O43933 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.46■□□□□ 0.39
PEX1O43933 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PEX1O43933 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PEX1O43933 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
PEX1O43933 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PEX1O43933 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PEX1O43933 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.45■□□□□ 0.38
PEX1O43933 TSPY21P-201ENST00000433481 731 ntBASIC17.45■□□□□ 0.38
PEX1O43933 BX664615.1-201ENST00000443558 458 ntBASIC17.45■□□□□ 0.38
PEX1O43933 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.45■□□□□ 0.38
PEX1O43933 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 DUX4L26-201ENST00000489078 1255 ntBASIC17.45■□□□□ 0.38
PEX1O43933 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
PEX1O43933 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PEX1O43933 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PEX1O43933 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 AC008556.1-201ENST00000610908 2040 ntBASIC17.45■□□□□ 0.38
PEX1O43933 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEX1O43933 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEX1O43933 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms