Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.39■□□□□ 0.7
EXTL3O43909 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EXTL3O43909 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
EXTL3O43909 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 DDX43P3-201ENST00000441064 443 ntBASIC19.39■□□□□ 0.69
EXTL3O43909 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.39■□□□□ 0.69
EXTL3O43909 AC104819.1-201ENST00000504587 486 ntBASIC19.39■□□□□ 0.69
EXTL3O43909 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.39■□□□□ 0.69
EXTL3O43909 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 AC006116.8-202ENST00000587620 1550 ntBASIC19.39■□□□□ 0.69
EXTL3O43909 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
EXTL3O43909 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EXTL3O43909 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
EXTL3O43909 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.39■□□□□ 0.69
EXTL3O43909 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.39■□□□□ 0.69
EXTL3O43909 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EXTL3O43909 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.38■□□□□ 0.69
EXTL3O43909 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
EXTL3O43909 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.38■□□□□ 0.69
EXTL3O43909 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.38■□□□□ 0.69
EXTL3O43909 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
EXTL3O43909 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.38■□□□□ 0.69
EXTL3O43909 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.38■□□□□ 0.69
EXTL3O43909 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.38■□□□□ 0.69
EXTL3O43909 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.38■□□□□ 0.69
EXTL3O43909 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EXTL3O43909 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
EXTL3O43909 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EXTL3O43909 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.37■□□□□ 0.69
EXTL3O43909 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.37■□□□□ 0.69
EXTL3O43909 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
EXTL3O43909 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EXTL3O43909 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 MINOS1P3-201ENST00000457048 203 ntBASIC19.37■□□□□ 0.69
EXTL3O43909 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.37■□□□□ 0.69
EXTL3O43909 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.37■□□□□ 0.69
EXTL3O43909 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.37■□□□□ 0.69
EXTL3O43909 AC009533.2-201ENST00000543664 586 ntBASIC19.37■□□□□ 0.69
EXTL3O43909 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EXTL3O43909 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
EXTL3O43909 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.37■□□□□ 0.69
EXTL3O43909 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EXTL3O43909 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
EXTL3O43909 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.36■□□□□ 0.69
EXTL3O43909 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.36■□□□□ 0.69
EXTL3O43909 AC018470.1-201ENST00000624790 3129 ntBASIC19.36■□□□□ 0.69
EXTL3O43909 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXTL3O43909 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXTL3O43909 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EXTL3O43909 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms