Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KDELR3O43731 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KDELR3O43731 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 NUS1P2-201ENST00000417358 873 ntBASIC18.12■□□□□ 0.49
KDELR3O43731 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 KRT18P31-201ENST00000506277 1292 ntBASIC18.12■□□□□ 0.49
KDELR3O43731 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.12■□□□□ 0.49
KDELR3O43731 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.12■□□□□ 0.49
KDELR3O43731 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.12■□□□□ 0.49
KDELR3O43731 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KDELR3O43731 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KDELR3O43731 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KDELR3O43731 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.12■□□□□ 0.49
KDELR3O43731 INTS4P1-201ENST00000438455 1935 ntBASIC18.11■□□□□ 0.49
KDELR3O43731 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KDELR3O43731 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.11■□□□□ 0.49
KDELR3O43731 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 FAM220CP-201ENST00000395253 831 ntBASIC18.11■□□□□ 0.49
KDELR3O43731 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KDELR3O43731 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.11■□□□□ 0.49
KDELR3O43731 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.11■□□□□ 0.49
KDELR3O43731 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.11■□□□□ 0.49
KDELR3O43731 AC091304.2-201ENST00000564639 760 ntBASIC18.11■□□□□ 0.49
KDELR3O43731 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.11■□□□□ 0.49
KDELR3O43731 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.11■□□□□ 0.49
KDELR3O43731 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KDELR3O43731 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
KDELR3O43731 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
KDELR3O43731 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KDELR3O43731 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KDELR3O43731 AC008764.6-201ENST00000595909 2069 ntBASIC18.1■□□□□ 0.49
KDELR3O43731 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
KDELR3O43731 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
KDELR3O43731 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 BX276092.7-203ENST00000637198 1536 ntBASIC18.1■□□□□ 0.49
KDELR3O43731 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.1■□□□□ 0.49
KDELR3O43731 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
KDELR3O43731 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
KDELR3O43731 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 AC122714.2-201ENST00000502787 707 ntBASIC18.1■□□□□ 0.49
KDELR3O43731 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.1■□□□□ 0.49
KDELR3O43731 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.1■□□□□ 0.49
KDELR3O43731 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.1■□□□□ 0.49
KDELR3O43731 AL732292.2-201ENST00000609649 430 ntBASIC18.1■□□□□ 0.49
KDELR3O43731 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KDELR3O43731 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.1■□□□□ 0.49
KDELR3O43731 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.1■□□□□ 0.49
KDELR3O43731 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KDELR3O43731 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KDELR3O43731 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms