Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH17O14917 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDH17O14917 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 KRT18P1-202ENST00000452408 1331 ntBASIC17.1■□□□□ 0.33
PCDH17O14917 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDH17O14917 LINC00896-202ENST00000609602 2128 ntBASIC17.09■□□□□ 0.33
PCDH17O14917 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 NUS1P1-201ENST00000446295 882 ntBASIC17.09■□□□□ 0.33
PCDH17O14917 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 VENTXP7-201ENST00000475503 772 ntBASIC17.09■□□□□ 0.33
PCDH17O14917 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDH17O14917 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH17O14917 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH17O14917 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 AC138028.4-201ENST00000564984 1845 ntBASIC17.09■□□□□ 0.33
PCDH17O14917 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDH17O14917 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH17O14917 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH17O14917 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH17O14917 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH17O14917 REXO1L9P-201ENST00000604264 2108 ntBASIC17.08■□□□□ 0.33
PCDH17O14917 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH17O14917 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH17O14917 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH17O14917 AL353692.3-201ENST00000407031 1396 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH17O14917 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH17O14917 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH17O14917 AC246785.2-201ENST00000432512 513 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 AP002383.4-201ENST00000442518 975 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH17O14917 MIR3180-1-201ENST00000580374 94 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 MIR3180-3-201ENST00000584616 94 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 AP002414.4-201ENST00000589764 1148 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 AC092119.3-201ENST00000612618 583 ntBASIC17.08■□□□□ 0.32
PCDH17O14917 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH17O14917 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDH17O14917 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDH17O14917 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH17O14917 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH17O14917 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH17O14917 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDH17O14917 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH17O14917 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH17O14917 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 AC012615.1-201ENST00000565797 1299 ntBASIC17.07■□□□□ 0.32
PCDH17O14917 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms