Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTN3Q9P232 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CNTN3Q9P232 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTN3Q9P232 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTN3Q9P232 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTN3Q9P232 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNTN3Q9P232 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTN3Q9P232 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNTN3Q9P232 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTN3Q9P232 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 BICD1-207ENST00000551848 1962 ntBASIC19.23■□□□□ 0.67
CNTN3Q9P232 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AC122714.2-201ENST00000502787 707 ntBASIC19.23■□□□□ 0.67
CNTN3Q9P232 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AL355877.3-201ENST00000622820 899 ntBASIC19.23■□□□□ 0.67
CNTN3Q9P232 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 AP000997.3-201ENST00000623333 2250 ntBASIC19.23■□□□□ 0.67
CNTN3Q9P232 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNTN3Q9P232 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTN3Q9P232 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 FLJ13224-201ENST00000313737 1514 ntBASIC19.22■□□□□ 0.67
CNTN3Q9P232 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ABCD1P5-201ENST00000445663 754 ntBASIC19.22■□□□□ 0.67
CNTN3Q9P232 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 AC008608.2-201ENST00000606089 416 ntBASIC19.22■□□□□ 0.67
CNTN3Q9P232 TP73-AS1-207ENST00000624167 988 ntBASIC19.22■□□□□ 0.67
CNTN3Q9P232 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CNTN3Q9P232 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTN3Q9P232 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTN3Q9P232 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTN3Q9P232 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 COX5BP2-201ENST00000392354 334 ntBASIC19.21■□□□□ 0.67
CNTN3Q9P232 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTN3Q9P232 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 FGFR3P6-201ENST00000457012 610 ntBASIC19.21■□□□□ 0.67
CNTN3Q9P232 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTN3Q9P232 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTN3Q9P232 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTN3Q9P232 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms