Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 AK4P3-201ENST00000418260 669 ntBASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 BX664615.1-201ENST00000443558 458 ntBASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 CCR12P-201ENST00000446203 998 ntBASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CALCOCO1Q9P1Z2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 HMGA1P5-201ENST00000412453 271 ntBASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.57■□□□□ 0.72
CALCOCO1Q9P1Z2 AC068418.2-201ENST00000577309 3703 ntBASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 AC022616.7-201ENST00000525383 220 ntBASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 KRT8P45-201ENST00000414328 1447 ntBASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 AC011676.5-201ENST00000624864 2660 ntBASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.56■□□□□ 0.72
CALCOCO1Q9P1Z2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
CALCOCO1Q9P1Z2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms