Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 AC093503.3-201ENST00000624917 2352 ntBASIC16.62■□□□□ 0.25
HPF1Q9NWY4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 AL121772.3-201ENST00000610840 674 ntBASIC16.61■□□□□ 0.25
HPF1Q9NWY4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HPF1Q9NWY4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.6■□□□□ 0.25
HPF1Q9NWY4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 MINOS1P3-201ENST00000457048 203 ntBASIC16.6■□□□□ 0.25
HPF1Q9NWY4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 FOSL1P1-201ENST00000511041 816 ntBASIC16.6■□□□□ 0.25
HPF1Q9NWY4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 AC099336.1-202ENST00000602961 463 ntBASIC16.6■□□□□ 0.25
HPF1Q9NWY4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HPF1Q9NWY4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 KRT18P65-201ENST00000439811 1286 ntBASIC16.59■□□□□ 0.25
HPF1Q9NWY4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPF1Q9NWY4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms