Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AP002383.4-201ENST00000442518 975 ntBASIC12.49□□□□□ -0.41
UPK3BQ9BT76 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AP002414.4-201ENST00000589764 1148 ntBASIC12.49□□□□□ -0.41
UPK3BQ9BT76 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 AL353692.3-201ENST00000407031 1396 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 AC012313.1-201ENST00000593393 3059 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 PRORSD1P-202ENST00000563365 2154 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MIR3180-1-201ENST00000580374 94 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MIR3180-3-201ENST00000584616 94 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 AC092119.3-201ENST00000612618 583 ntBASIC12.48□□□□□ -0.41
UPK3BQ9BT76 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UPK3BQ9BT76 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 AC246785.2-201ENST00000432512 513 ntBASIC12.47□□□□□ -0.41
UPK3BQ9BT76 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UPK3BQ9BT76 VENTXP7-201ENST00000475503 772 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms