Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 AL137784.2-201ENST00000607332 1000 ntBASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 HLA-A-209ENST00000638375 975 ntBASIC13.57□□□□□ -0.24
AP1S3Q96PC3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 MTMR9LP-203ENST00000426597 1545 ntBASIC13.57□□□□□ -0.24
AP1S3Q96PC3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AC083906.2-201ENST00000511578 360 ntBASIC13.56□□□□□ -0.24
AP1S3Q96PC3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.56□□□□□ -0.24
AP1S3Q96PC3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.55□□□□□ -0.24
AP1S3Q96PC3 MYC-209ENST00000641252 345 ntBASIC13.55□□□□□ -0.24
AP1S3Q96PC3 AC068587.9-201ENST00000641814 219 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms