Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 AL671277.2-201ENST00000458060 996 ntBASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM5Q96HC4 AC097374.2-201ENST00000618617 1306 ntBASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 Z83836.1-201ENST00000624605 1642 ntBASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 AC096633.1-201ENST00000422446 749 ntBASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 TMPOP1-202ENST00000424642 1267 ntBASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM5Q96HC4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 BX276092.7-203ENST00000637198 1536 ntBASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM5Q96HC4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms