Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC155Q8N6L0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 AKR1C7P-201ENST00000305623 895 ntBASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 AC120114.3-201ENST00000611923 658 ntBASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 BX640515.1-201ENST00000617215 977 ntBASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC155Q8N6L0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 AC006538.3-201ENST00000612495 578 ntBASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC155Q8N6L0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 HLA-A-201ENST00000376802 1334 ntBASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC155Q8N6L0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC155Q8N6L0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms