Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.59■□□□□ 0.57
SCML4Q8N228 NUS1P2-201ENST00000417358 873 ntBASIC18.59■□□□□ 0.57
SCML4Q8N228 AL450487.1-201ENST00000426799 995 ntBASIC18.59■□□□□ 0.57
SCML4Q8N228 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.59■□□□□ 0.57
SCML4Q8N228 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.59■□□□□ 0.57
SCML4Q8N228 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.59■□□□□ 0.57
SCML4Q8N228 AL591684.3-201ENST00000605187 298 ntBASIC18.59■□□□□ 0.57
SCML4Q8N228 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.59■□□□□ 0.57
SCML4Q8N228 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.59■□□□□ 0.57
SCML4Q8N228 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCML4Q8N228 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 AC006116.8-202ENST00000587620 1550 ntBASIC18.59■□□□□ 0.57
SCML4Q8N228 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCML4Q8N228 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.58■□□□□ 0.57
SCML4Q8N228 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCML4Q8N228 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCML4Q8N228 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.58■□□□□ 0.57
SCML4Q8N228 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCML4Q8N228 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.58■□□□□ 0.56
SCML4Q8N228 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCML4Q8N228 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.58■□□□□ 0.56
SCML4Q8N228 AC005104.2-201ENST00000427818 678 ntBASIC18.58■□□□□ 0.56
SCML4Q8N228 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.58■□□□□ 0.56
SCML4Q8N228 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.58■□□□□ 0.56
SCML4Q8N228 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
SCML4Q8N228 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.58■□□□□ 0.56
SCML4Q8N228 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SCML4Q8N228 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SCML4Q8N228 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SCML4Q8N228 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.58■□□□□ 0.56
SCML4Q8N228 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCML4Q8N228 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 AC111152.3-201ENST00000569699 673 ntBASIC18.57■□□□□ 0.56
SCML4Q8N228 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.57■□□□□ 0.56
SCML4Q8N228 AL732292.2-201ENST00000609649 430 ntBASIC18.57■□□□□ 0.56
SCML4Q8N228 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.57■□□□□ 0.56
SCML4Q8N228 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.57■□□□□ 0.56
SCML4Q8N228 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 AC008764.6-201ENST00000595909 2069 ntBASIC18.57■□□□□ 0.56
SCML4Q8N228 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SCML4Q8N228 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCML4Q8N228 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.57■□□□□ 0.56
SCML4Q8N228 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCML4Q8N228 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SCML4Q8N228 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms