Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 AC231657.2-201ENST00000624556 255 ntBASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CROCCP3Q8IVE0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 AC008556.1-201ENST00000610908 2040 ntBASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 AC137761.2-201ENST00000561729 223 ntBASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 AC145350.3-201ENST00000569033 163 ntBASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CROCCP3Q8IVE0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 AC124283.5-201ENST00000624661 1809 ntBASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 AC063926.3-201ENST00000624734 5658 ntBASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CROCCP3Q8IVE0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms