Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.062e-7■□□□□ 10.6
LARP4Q71RC2 FKBP1A-207ENST00000474657 641 ntTSL 211.16□□□□□ -0.622e-7■□□□□ 10.6
LARP4Q71RC2 MYDGF-202ENST00000596031 335 ntTSL 312.76□□□□□ -0.378e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-204ENST00000557961 591 ntTSL 221.69■■□□□ 1.064e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.85■□□□□ 0.614e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-220ENST00000559930 678 ntTSL 416.12■□□□□ 0.174e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC10.94□□□□□ -0.664e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-210ENST00000558893 1209 ntTSL 1 (best)9.93□□□□□ -0.824e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-209ENST00000558830 616 ntTSL 37.08□□□□□ -1.284e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-223ENST00000561171 933 ntTSL 26.31□□□□□ -1.44e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-206ENST00000558522 1074 ntTSL 26.06□□□□□ -1.444e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-218ENST00000559697 551 ntTSL 55.55□□□□□ -1.524e-7■□□□□ 10.6
LARP4Q71RC2 MORF4L1-216ENST00000559619 448 ntTSL 24.76□□□□□ -1.654e-7■□□□□ 10.6
LARP4Q71RC2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.143e-7■□□□□ 10.6
LARP4Q71RC2 MICALL2-204ENST00000467394 2080 ntTSL 220■□□□□ 0.792e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-209ENST00000479007 1855 ntTSL 219.36■□□□□ 0.692e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-215ENST00000496184 2722 ntTSL 217.34■□□□□ 0.372e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-205ENST00000467783 639 ntTSL 316.4■□□□□ 0.222e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-206ENST00000470807 668 ntTSL 315.63■□□□□ 0.092e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-207ENST00000471899 899 ntTSL 214.3□□□□□ -0.122e-10■□□□□ 10.6
LARP4Q71RC2 MICALL2-214ENST00000493998 404 ntTSL 211.7□□□□□ -0.542e-10■□□□□ 10.6
LARP4Q71RC2 RPL10-208ENST00000449494 622 ntTSL 514.04□□□□□ -0.162e-16■□□□□ 10.6
LARP4Q71RC2 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.6□□□□□ -0.392e-16■□□□□ 10.6
LARP4Q71RC2 RPL10-209ENST00000451365 713 ntTSL 1 (best)9.81□□□□□ -0.842e-16■□□□□ 10.6
LARP4Q71RC2 RPL10-211ENST00000467168 802 ntTSL 29.65□□□□□ -0.862e-16■□□□□ 10.6
LARP4Q71RC2 RPL10-205ENST00000427682 457 ntTSL 59.55□□□□□ -0.882e-16■□□□□ 10.6
LARP4Q71RC2 RPL10-206ENST00000428169 292 ntTSL 58.91□□□□□ -0.982e-16■□□□□ 10.6
LARP4Q71RC2 DDOST-205ENST00000477229 766 ntTSL 216.12■□□□□ 0.172e-14■□□□□ 10.6
LARP4Q71RC2 DDOST-203ENST00000464364 502 ntTSL 513.07□□□□□ -0.322e-14■□□□□ 10.6
LARP4Q71RC2 FCGRT-205ENST00000593431 582 ntTSL 317.78■□□□□ 0.441e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-209ENST00000596147 383 ntTSL 316.34■□□□□ 0.211e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-218ENST00000600273 582 ntTSL 215.8■□□□□ 0.121e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-215ENST00000598936 870 ntTSL 314.54□□□□□ -0.081e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-216ENST00000599701 579 ntTSL 214.37□□□□□ -0.111e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-206ENST00000594823 819 ntTSL 513.83□□□□□ -0.21e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-213ENST00000598491 578 ntTSL 513.35□□□□□ -0.271e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-207ENST00000595677 714 ntTSL 513.33□□□□□ -0.281e-9■□□□□ 10.6
LARP4Q71RC2 FCGRT-204ENST00000593381 566 ntTSL 412.61□□□□□ -0.391e-9■□□□□ 10.6
LARP4Q71RC2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.89□□□□□ -0.039e-10■□□□□ 10.6
LARP4Q71RC2 PTPRF-206ENST00000429895 6312 ntTSL 1 (best)14.69□□□□□ -0.069e-10■□□□□ 10.6
LARP4Q71RC2 PTPRF-215ENST00000496447 5887 ntTSL 1 (best)12.54□□□□□ -0.49e-10■□□□□ 10.6
LARP4Q71RC2 PTPRF-203ENST00000372407 4600 ntTSL 210.88□□□□□ -0.679e-10■□□□□ 10.6
LARP4Q71RC2 CNPY2-204ENST00000546937 984 ntTSL 27.09□□□□□ -1.275e-7■□□□□ 10.6
LARP4Q71RC2 CNPY2-203ENST00000546466 673 ntTSL 35.87□□□□□ -1.475e-7■□□□□ 10.6
LARP4Q71RC2 ITM2C-210ENST00000620962 501 ntBASIC18.13■□□□□ 0.492e-7■□□□□ 10.6
LARP4Q71RC2 PLEKHJ1-203ENST00000586497 573 ntTSL 323.8■■□□□ 1.45e-7■□□□□ 10.6
LARP4Q71RC2 PLEKHJ1-207ENST00000588356 610 ntTSL 422.32■■□□□ 1.165e-7■□□□□ 10.6
LARP4Q71RC2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.75■■□□□ 1.075e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-203ENST00000587009 1967 ntTSL 220.48■□□□□ 0.875e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.755e-7■□□□□ 10.6
LARP4Q71RC2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.685e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-206ENST00000590466 803 ntTSL 318.49■□□□□ 0.555e-7■□□□□ 10.6
LARP4Q71RC2 SLC39A3-206ENST00000590875 572 ntTSL 218.45■□□□□ 0.545e-7■□□□□ 10.6
LARP4Q71RC2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.44■□□□□ 0.545e-7■□□□□ 10.6
LARP4Q71RC2 HDGFL2-206ENST00000614903 239 ntTSL 518.3■□□□□ 0.525e-7■□□□□ 10.6
LARP4Q71RC2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.27■□□□□ 0.525e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.515e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-207ENST00000591919 1613 ntTSL 517.97■□□□□ 0.475e-7■□□□□ 10.6
LARP4Q71RC2 HDGFL2-209ENST00000619255 320 ntTSL 317.63■□□□□ 0.415e-7■□□□□ 10.6
LARP4Q71RC2 SLC39A3-205ENST00000589363 524 ntTSL 317.51■□□□□ 0.395e-7■□□□□ 10.6
LARP4Q71RC2 HDGFL2-201ENST00000587016 870 ntTSL 317.42■□□□□ 0.385e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.345e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.315e-7■□□□□ 10.6
LARP4Q71RC2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.35e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-221ENST00000565397 810 ntTSL 316.88■□□□□ 0.295e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-204ENST00000587324 712 ntTSL 316.84■□□□□ 0.295e-7■□□□□ 10.6
LARP4Q71RC2 REXO2-213ENST00000543131 539 ntTSL 316.74■□□□□ 0.275e-7■□□□□ 10.6
LARP4Q71RC2 POP5-209ENST00000543355 794 ntTSL 316.61■□□□□ 0.255e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.07■□□□□ 0.165e-7■□□□□ 10.6
LARP4Q71RC2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.152e-8■□□□□ 10.6
LARP4Q71RC2 AC104809.2-202ENST00000457369 800 ntTSL 315.85■□□□□ 0.135e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.49■□□□□ 0.075e-7■□□□□ 10.6
LARP4Q71RC2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.065e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.62□□□□□ -0.075e-7■□□□□ 10.6
LARP4Q71RC2 TTYH1-213ENST00000476863 581 ntTSL 314.55□□□□□ -0.082e-6■□□□□ 10.6
LARP4Q71RC2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.33□□□□□ -0.125e-7■□□□□ 10.6
LARP4Q71RC2 UBXN6-205ENST00000588238 4598 nt14.29□□□□□ -0.125e-7■□□□□ 10.6
LARP4Q71RC2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.13□□□□□ -0.155e-7■□□□□ 10.6
LARP4Q71RC2 REXO2-205ENST00000539119 664 ntTSL 314.06□□□□□ -0.165e-7■□□□□ 10.6
LARP4Q71RC2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.172e-8■□□□□ 10.6
LARP4Q71RC2 ADRM1-203ENST00000465805 630 ntTSL 213.87□□□□□ -0.195e-7■□□□□ 10.6
LARP4Q71RC2 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.372e-8■□□□□ 10.6
LARP4Q71RC2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.6□□□□□ -0.395e-7■□□□□ 10.6
LARP4Q71RC2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.6□□□□□ -0.395e-7■□□□□ 10.6
LARP4Q71RC2 POP5-201ENST00000341039 913 ntTSL 2 BASIC11.5□□□□□ -0.575e-7■□□□□ 10.6
LARP4Q71RC2 PRPF8-206ENST00000572723 959 ntTSL 210.65□□□□□ -0.75e-7■□□□□ 10.6
LARP4Q71RC2 GGCT-208ENST00000447901 784 ntTSL 210.6□□□□□ -0.715e-7■□□□□ 10.6
LARP4Q71RC2 GGCT-207ENST00000440082 1012 ntTSL 210.38□□□□□ -0.755e-7■□□□□ 10.6
LARP4Q71RC2 SLC39A3-204ENST00000589166 491 ntTSL 29.78□□□□□ -0.845e-7■□□□□ 10.6
LARP4Q71RC2 GGCT-204ENST00000409390 767 ntTSL 2 BASIC9.16□□□□□ -0.945e-7■□□□□ 10.6
LARP4Q71RC2 POP5-208ENST00000542776 821 ntTSL 28.94□□□□□ -0.985e-7■□□□□ 10.6
LARP4Q71RC2 CKLF-208ENST00000563092 365 ntTSL 37.41□□□□□ -1.222e-11■□□□□ 10.6
LARP4Q71RC2 POP5-206ENST00000541834 653 ntTSL 26.76□□□□□ -1.335e-7■□□□□ 10.6
LARP4Q71RC2 CKLF-CMTM1-203ENST00000529718 478 ntAPPRIS ALT2 TSL 26.31□□□□□ -1.42e-11■□□□□ 10.6
LARP4Q71RC2 GGCT-206ENST00000426081 889 ntTSL 35.33□□□□□ -1.565e-7■□□□□ 10.6
LARP4Q71RC2 POP5-207ENST00000542568 578 nt4.98□□□□□ -1.615e-7■□□□□ 10.6
LARP4Q71RC2 B2M-210ENST00000560681 572 ntTSL 413.08□□□□□ -0.322e-9■□□□□ 10.6
LARP4Q71RC2 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.862e-9■□□□□ 10.6
LARP4Q71RC2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.42■□□□□ 0.222e-13■□□□□ 10.6
LARP4Q71RC2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.682e-11■□□□□ 10.5
Retrieved 100 of 15,922 protein–RNA pairs in 272 ms