Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM88Q6PEY1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 SDHAP1-207ENST00000440850 2000 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 MIPEPP3-201ENST00000412105 444 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 BX276092.2-201ENST00000417668 665 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 AC007322.3-201ENST00000426526 701 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 MIR4758-201ENST00000577688 71 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 FAM21FP-204ENST00000608637 956 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TMEM88Q6PEY1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AL499627.1-201ENST00000569373 2188 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC069152.1-201ENST00000438030 544 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC098934.4-201ENST00000564127 592 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC133041.1-202ENST00000642053 222 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 FEM1AP3-201ENST00000403722 1741 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 AC010980.2-201ENST00000587099 1412 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 TCAF2P1-201ENST00000291129 2421 ntBASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM88Q6PEY1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms