Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 AP000997.3-201ENST00000623333 2250 ntBASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 KRT18P31-201ENST00000506277 1292 ntBASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC178Q5BJE1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 FAM220CP-201ENST00000395253 831 ntBASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 AL450487.1-201ENST00000426799 995 ntBASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 AC096582.2-201ENST00000510860 516 ntBASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 AC138894.3-201ENST00000603787 634 ntBASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 AC090340.1-201ENST00000620778 4980 ntBASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC178Q5BJE1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 MIR5100-201ENST00000579544 119 ntBASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 AC012313.10-201ENST00000623509 926 ntBASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC178Q5BJE1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC178Q5BJE1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC178Q5BJE1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC178Q5BJE1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms