Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
IRX4P78413 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
IRX4P78413 CHCHD2P8-201ENST00000429873 447 ntBASIC18.65■□□□□ 0.58
IRX4P78413 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.65■□□□□ 0.58
IRX4P78413 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 AL160237.2-201ENST00000556165 472 ntBASIC18.65■□□□□ 0.58
IRX4P78413 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
IRX4P78413 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 HEIH-201ENST00000623091 1652 ntBASIC18.65■□□□□ 0.58
IRX4P78413 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 KRT18P1-202ENST00000452408 1331 ntBASIC18.65■□□□□ 0.58
IRX4P78413 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
IRX4P78413 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
IRX4P78413 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IRX4P78413 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.64■□□□□ 0.58
IRX4P78413 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX4P78413 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
IRX4P78413 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.64■□□□□ 0.58
IRX4P78413 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX4P78413 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX4P78413 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IRX4P78413 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
IRX4P78413 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.64■□□□□ 0.57
IRX4P78413 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.64■□□□□ 0.57
IRX4P78413 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.64■□□□□ 0.57
IRX4P78413 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IRX4P78413 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.64■□□□□ 0.57
IRX4P78413 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
IRX4P78413 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.64■□□□□ 0.57
IRX4P78413 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IRX4P78413 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
IRX4P78413 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX4P78413 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
IRX4P78413 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 AC079781.3-201ENST00000449110 356 ntBASIC18.63■□□□□ 0.57
IRX4P78413 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.63■□□□□ 0.57
IRX4P78413 AC091304.2-201ENST00000564639 760 ntBASIC18.63■□□□□ 0.57
IRX4P78413 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 AC079602.3-201ENST00000623931 403 ntBASIC18.63■□□□□ 0.57
IRX4P78413 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.63■□□□□ 0.57
IRX4P78413 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.63■□□□□ 0.57
IRX4P78413 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 GPAT2P1-201ENST00000444924 1672 ntBASIC18.63■□□□□ 0.57
IRX4P78413 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
IRX4P78413 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IRX4P78413 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms