Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 PVRIG2P-201ENST00000435460 978 ntBASIC16.68■□□□□ 0.26
RNF144AP50876 AC112907.2-201ENST00000448639 330 ntBASIC16.68■□□□□ 0.26
RNF144AP50876 VENTXP5-201ENST00000523979 775 ntBASIC16.68■□□□□ 0.26
RNF144AP50876 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
RNF144AP50876 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF144AP50876 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF144AP50876 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF144AP50876 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF144AP50876 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RNF144AP50876 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF144AP50876 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF144AP50876 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
RNF144AP50876 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.67■□□□□ 0.26
RNF144AP50876 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF144AP50876 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF144AP50876 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF144AP50876 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF144AP50876 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF144AP50876 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF144AP50876 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 GNAS-203ENST00000306120 1878 ntBASIC16.66■□□□□ 0.26
RNF144AP50876 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
RNF144AP50876 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF144AP50876 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF144AP50876 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 AL031432.5-201ENST00000641059 760 ntBASIC16.66■□□□□ 0.26
RNF144AP50876 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF144AP50876 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF144AP50876 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF144AP50876 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF144AP50876 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF144AP50876 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF144AP50876 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF144AP50876 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RNF144AP50876 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF144AP50876 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF144AP50876 DUX4L26-201ENST00000489078 1255 ntBASIC16.65■□□□□ 0.26
RNF144AP50876 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF144AP50876 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF144AP50876 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF144AP50876 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
RNF144AP50876 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms