Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP4AP20648 AC022898.2-201ENST00000616822 1312 ntBASIC19.84■□□□□ 0.77
ATP4AP20648 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP4AP20648 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP4AP20648 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP4AP20648 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP4AP20648 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP4AP20648 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.77
ATP4AP20648 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
ATP4AP20648 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 FAM220CP-201ENST00000395253 831 ntBASIC19.83■□□□□ 0.77
ATP4AP20648 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP4AP20648 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP4AP20648 RBM17P3-201ENST00000417687 1192 ntBASIC19.83■□□□□ 0.77
ATP4AP20648 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP4AP20648 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP4AP20648 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP4AP20648 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP4AP20648 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP4AP20648 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP4AP20648 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.83■□□□□ 0.76
ATP4AP20648 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.83■□□□□ 0.76
ATP4AP20648 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.83■□□□□ 0.76
ATP4AP20648 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP4AP20648 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ATP4AP20648 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.83■□□□□ 0.76
ATP4AP20648 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP4AP20648 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP4AP20648 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ATP4AP20648 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP4AP20648 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ATP4AP20648 AP000867.4-201ENST00000641616 219 ntBASIC19.82■□□□□ 0.76
ATP4AP20648 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP4AP20648 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP4AP20648 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP4AP20648 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP4AP20648 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ATP4AP20648 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP4AP20648 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP4AP20648 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP4AP20648 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP4AP20648 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP4AP20648 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP4AP20648 HNRNPDP1-201ENST00000439535 754 ntBASIC19.81■□□□□ 0.76
ATP4AP20648 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP4AP20648 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP4AP20648 AL662844.1-201ENST00000546340 181 ntBASIC19.81■□□□□ 0.76
ATP4AP20648 SART3-203ENST00000546611 1184 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms