Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB4AP20338 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB4AP20338 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RAB4AP20338 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB4AP20338 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB4AP20338 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.75□□□□□ -0.21
RAB4AP20338 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.75□□□□□ -0.21
RAB4AP20338 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.75□□□□□ -0.21
RAB4AP20338 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.75□□□□□ -0.21
RAB4AP20338 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 AL139246.5-201ENST00000606645 996 ntBASIC13.75□□□□□ -0.21
RAB4AP20338 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.75□□□□□ -0.21
RAB4AP20338 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB4AP20338 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RAB4AP20338 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.75□□□□□ -0.21
RAB4AP20338 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RAB4AP20338 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB4AP20338 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 AC069236.1-201ENST00000604339 616 ntBASIC13.74□□□□□ -0.21
RAB4AP20338 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 AC138969.2-201ENST00000532739 9932 ntBASIC13.74□□□□□ -0.21
RAB4AP20338 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB4AP20338 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms