Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.28■□□□□ 0.52
CLDN11O75508 AL591684.3-201ENST00000605187 298 ntBASIC18.28■□□□□ 0.52
CLDN11O75508 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN11O75508 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN11O75508 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN11O75508 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN11O75508 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN11O75508 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLDN11O75508 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN11O75508 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 FAM220CP-201ENST00000395253 831 ntBASIC18.27■□□□□ 0.52
CLDN11O75508 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CLDN11O75508 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN11O75508 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN11O75508 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN11O75508 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN11O75508 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN11O75508 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN11O75508 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLDN11O75508 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN11O75508 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 INTS4P1-201ENST00000438455 1935 ntBASIC18.27■□□□□ 0.51
CLDN11O75508 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CLDN11O75508 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN11O75508 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN11O75508 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CLDN11O75508 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN11O75508 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 DDX43P3-201ENST00000441064 443 ntBASIC18.26■□□□□ 0.51
CLDN11O75508 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN11O75508 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN11O75508 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN11O75508 IFNL4P1-201ENST00000607083 540 ntBASIC18.26■□□□□ 0.51
CLDN11O75508 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN11O75508 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN11O75508 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN11O75508 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN11O75508 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN11O75508 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 UNC93B7-201ENST00000509439 705 ntBASIC18.25■□□□□ 0.51
CLDN11O75508 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN11O75508 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CLDN11O75508 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN11O75508 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLDN11O75508 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLDN11O75508 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN11O75508 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN11O75508 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms