Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDN4O14493 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 AP002383.4-201ENST00000442518 975 ntBASIC16.88■□□□□ 0.29
CLDN4O14493 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.88■□□□□ 0.29
CLDN4O14493 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN4O14493 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN4O14493 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 NPAP1P7-201ENST00000613027 823 ntBASIC16.88■□□□□ 0.29
CLDN4O14493 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CLDN4O14493 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN4O14493 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN4O14493 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN4O14493 AL390961.4-201ENST00000623958 2535 ntBASIC16.88■□□□□ 0.29
CLDN4O14493 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN4O14493 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN4O14493 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.87■□□□□ 0.29
CLDN4O14493 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN4O14493 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN4O14493 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN4O14493 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 AP000997.3-201ENST00000623333 2250 ntBASIC16.86■□□□□ 0.29
CLDN4O14493 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN4O14493 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN4O14493 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN4O14493 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLDN4O14493 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN4O14493 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CLDN4O14493 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN4O14493 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CLDN4O14493 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN4O14493 HCG4P8-203ENST00000443049 980 ntBASIC16.86■□□□□ 0.29
CLDN4O14493 LINC00265-3P-201ENST00000447588 903 ntBASIC16.86■□□□□ 0.29
CLDN4O14493 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN4O14493 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN4O14493 TPSP2-201ENST00000561760 610 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms