Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 AL357033.4-201ENST00000617703 1807 ntBASIC14.53□□□□□ -0.08
LINC00862A6NCI5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 GPAT2P1-201ENST00000444924 1672 ntBASIC14.53□□□□□ -0.08
LINC00862A6NCI5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 SLC7A5P2-201ENST00000553010 536 ntBASIC14.53□□□□□ -0.08
LINC00862A6NCI5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00862A6NCI5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 GRK6P1-201ENST00000400595 1711 ntBASIC14.52□□□□□ -0.08
LINC00862A6NCI5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00862A6NCI5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00862A6NCI5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00862A6NCI5 AC009299.2-201ENST00000482477 511 ntBASIC14.51□□□□□ -0.09
LINC00862A6NCI5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms