Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LMBRD1Q9NUN5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 AL355802.2-201ENST00000402069 882 ntBASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 CR769767.2-201ENST00000622735 460 ntBASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LMBRD1Q9NUN5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 LINC00167-201ENST00000530583 1419 ntBASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LMBRD1Q9NUN5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 MIR3180-4-201ENST00000582223 153 ntBASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LMBRD1Q9NUN5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 FAM197Y1-201ENST00000421178 764 ntBASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 AC116562.2-201ENST00000507042 360 ntBASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 WWOX-216ENST00000569818 525 ntBASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 DGCR10-201ENST00000609839 495 ntBASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 AC008894.3-201ENST00000624324 3103 ntBASIC20.56■□□□□ 0.88
LMBRD1Q9NUN5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 AC022898.2-201ENST00000616822 1312 ntBASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LMBRD1Q9NUN5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms