Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 AL353692.3-201ENST00000407031 1396 ntBASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARHGEF4Q9NR80 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 AC138894.3-201ENST00000603787 634 ntBASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARHGEF4Q9NR80 KRT89P-201ENST00000620027 1478 ntBASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 EMBP1-201ENST00000458200 901 ntBASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 KRT18P31-201ENST00000506277 1292 ntBASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ARHGEF4Q9NR80 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARHGEF4Q9NR80 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 KRT17P6-201ENST00000453795 1220 ntBASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 AC099336.1-202ENST00000602961 463 ntBASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ARHGEF4Q9NR80 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms