Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 AL121912.1-201ENST00000603683 238 ntBASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 IGHV3-41-201ENST00000613121 348 ntBASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR1BQ9H9Y6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 AC099398.1-201ENST00000567919 2776 ntBASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.77■□□□□ 0.43
POLR1BQ9H9Y6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 KRT18P23-201ENST00000435622 1283 ntBASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AP003733.1-201ENST00000491725 852 ntBASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AC074051.2-201ENST00000565115 352 ntBASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AC005332.3-201ENST00000589904 676 ntBASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 AC138894.3-201ENST00000603787 634 ntBASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR1BQ9H9Y6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 AC104390.1-201ENST00000555663 520 ntBASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 AC010240.3-201ENST00000607688 395 ntBASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 AL353801.3-201ENST00000609898 542 ntBASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR1BQ9H9Y6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR1BQ9H9Y6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms