Protein–RNA interactions for Protein: Q96SJ8

TSPAN18, Tetraspanin-18, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18Q96SJ8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 AP005117.1-201ENST00000584346 1413 ntBASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN18Q96SJ8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 AF238378.1-201ENST00000526806 358 ntBASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 AC104692.2-201ENST00000603054 253 ntBASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 AP000867.4-201ENST00000641616 219 ntBASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN18Q96SJ8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TSPAN18Q96SJ8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.14■□□□□ 0.66
TSPAN18Q96SJ8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.14■□□□□ 0.66
TSPAN18Q96SJ8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.14■□□□□ 0.66
TSPAN18Q96SJ8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 AC064862.7-201ENST00000604520 867 ntBASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 AD001527.2-201ENST00000622994 785 ntBASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN18Q96SJ8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SCARNA2-201ENST00000458748 420 ntBASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AC008608.2-201ENST00000606089 416 ntBASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN18Q96SJ8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TSPAN18Q96SJ8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms