Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 AP000867.3-201ENST00000524675 377 ntBASIC18.84■□□□□ 0.61
RNF139Q8WU17 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF139Q8WU17 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF139Q8WU17 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF139Q8WU17 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
RNF139Q8WU17 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RNF139Q8WU17 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF139Q8WU17 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 AC068472.1-201ENST00000474589 881 ntBASIC18.83■□□□□ 0.6
RNF139Q8WU17 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 Z69720.1-201ENST00000601483 472 ntBASIC18.83■□□□□ 0.6
RNF139Q8WU17 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF139Q8WU17 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF139Q8WU17 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 MIR3652-201ENST00000579335 131 ntBASIC18.82■□□□□ 0.6
RNF139Q8WU17 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.82■□□□□ 0.6
RNF139Q8WU17 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 AC132938.6-201ENST00000623828 1655 ntBASIC18.82■□□□□ 0.6
RNF139Q8WU17 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF139Q8WU17 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF139Q8WU17 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 AC233702.3-201ENST00000578656 1387 ntBASIC18.81■□□□□ 0.6
RNF139Q8WU17 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 MTCL1P1-201ENST00000446207 792 ntBASIC18.81■□□□□ 0.6
RNF139Q8WU17 AC104819.1-201ENST00000504587 486 ntBASIC18.81■□□□□ 0.6
RNF139Q8WU17 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF139Q8WU17 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF139Q8WU17 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF139Q8WU17 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF139Q8WU17 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms