Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 AKR1C7P-201ENST00000305623 895 ntBASIC20.31■□□□□ 0.84
RETREG2Q8NC44 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 REXO1L6P-202ENST00000619970 1078 ntBASIC20.31■□□□□ 0.84
RETREG2Q8NC44 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETREG2Q8NC44 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 PCDHB18P-201ENST00000524813 2368 ntBASIC20.3■□□□□ 0.84
RETREG2Q8NC44 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETREG2Q8NC44 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
RETREG2Q8NC44 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 AC117500.6-201ENST00000624871 588 ntBASIC20.29■□□□□ 0.84
RETREG2Q8NC44 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.29■□□□□ 0.84
RETREG2Q8NC44 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms