Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 AC138028.4-201ENST00000564984 1845 ntBASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB42Q8N4Z0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 AC132938.6-201ENST00000623828 1655 ntBASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 AC124864.1-201ENST00000623408 392 ntBASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB42Q8N4Z0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AL390961.4-201ENST00000623958 2535 ntBASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AC011840.4-201ENST00000578471 627 ntBASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 AL592071.1-201ENST00000611956 408 ntBASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 KRT18P1-202ENST00000452408 1331 ntBASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB42Q8N4Z0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 UPK3BP1-201ENST00000428678 509 ntBASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms