Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.33■□□□□ 0.52
SIX5Q8N196 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.33■□□□□ 0.52
SIX5Q8N196 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.33■□□□□ 0.52
SIX5Q8N196 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.33■□□□□ 0.52
SIX5Q8N196 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.33■□□□□ 0.52
SIX5Q8N196 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIX5Q8N196 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
SIX5Q8N196 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SIX5Q8N196 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SIX5Q8N196 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
SIX5Q8N196 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.32■□□□□ 0.52
SIX5Q8N196 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
SIX5Q8N196 AC006557.2-201ENST00000592985 1240 ntBASIC18.32■□□□□ 0.52
SIX5Q8N196 AC106028.4-201ENST00000614509 607 ntBASIC18.32■□□□□ 0.52
SIX5Q8N196 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.32■□□□□ 0.52
SIX5Q8N196 AL022326.1-202ENST00000641533 845 ntBASIC18.32■□□□□ 0.52
SIX5Q8N196 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIX5Q8N196 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
SIX5Q8N196 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.32■□□□□ 0.52
SIX5Q8N196 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIX5Q8N196 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIX5Q8N196 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.31■□□□□ 0.52
SIX5Q8N196 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.31■□□□□ 0.52
SIX5Q8N196 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 KRT18P27-201ENST00000427733 1299 ntBASIC18.31■□□□□ 0.52
SIX5Q8N196 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 CNN2P11-201ENST00000429351 262 ntBASIC18.31■□□□□ 0.52
SIX5Q8N196 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 AP002472.1-201ENST00000577490 586 ntBASIC18.31■□□□□ 0.52
SIX5Q8N196 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIX5Q8N196 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.31■□□□□ 0.52
SIX5Q8N196 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIX5Q8N196 AC002310.6-201ENST00000624451 1377 ntBASIC18.3■□□□□ 0.52
SIX5Q8N196 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX5Q8N196 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SIX5Q8N196 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.3■□□□□ 0.52
SIX5Q8N196 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.3■□□□□ 0.52
SIX5Q8N196 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIX5Q8N196 KRT18P65-201ENST00000439811 1286 ntBASIC18.3■□□□□ 0.52
SIX5Q8N196 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIX5Q8N196 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.3■□□□□ 0.52
SIX5Q8N196 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.3■□□□□ 0.52
SIX5Q8N196 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms