Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.22□□□□□ -1.092e-7■□□□□ 9.2
SND1Q7KZF4 PSMA1-205ENST00000527632 693 ntTSL 28.14□□□□□ -1.116e-6■□□□□ 9.2
SND1Q7KZF4 AC087380.1-203ENST00000420726 752 ntTSL 57.9□□□□□ -1.146e-6■□□□□ 9.2
SND1Q7KZF4 NASP-223ENST00000534450 632 ntTSL 27.74□□□□□ -1.171e-22■□□□□ 9.2
SND1Q7KZF4 AC087380.1-201ENST00000420465 1001 ntTSL 37.73□□□□□ -1.176e-6■□□□□ 9.2
SND1Q7KZF4 CD58-205ENST00000526981 395 ntAPPRIS ALT2 TSL 1 (best)7.66□□□□□ -1.182e-7■□□□□ 9.2
SND1Q7KZF4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.66□□□□□ -1.186e-6■□□□□ 9.2
SND1Q7KZF4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC7.63□□□□□ -1.192e-7■□□□□ 9.2
SND1Q7KZF4 BTF3-205ENST00000509708 515 ntTSL 57.44□□□□□ -1.221e-9■□□□□ 9.2
SND1Q7KZF4 SDHB-204ENST00000475049 397 ntTSL 37.25□□□□□ -1.256e-6■□□□□ 9.2
SND1Q7KZF4 SEC31A-232ENST00000511338 657 ntTSL 57.18□□□□□ -1.263e-8■□□□□ 9.2
SND1Q7KZF4 MCM4-204ENST00000518382 366 ntTSL 37.08□□□□□ -1.286e-6■□□□□ 9.2
SND1Q7KZF4 CD47-205ENST00000517766 538 ntTSL 27.01□□□□□ -1.292e-7■□□□□ 9.2
SND1Q7KZF4 DLD-210ENST00000478414 549 ntTSL 46.97□□□□□ -1.293e-8■□□□□ 9.2
SND1Q7KZF4 NASP-214ENST00000527932 650 ntTSL 36.95□□□□□ -1.31e-22■□□□□ 9.2
SND1Q7KZF4 TMX2-205ENST00000528042 763 ntTSL 26.49□□□□□ -1.376e-6■□□□□ 9.2
SND1Q7KZF4 PSMA1-210ENST00000531023 645 ntTSL 26.47□□□□□ -1.376e-6■□□□□ 9.2
SND1Q7KZF4 FKBP4-202ENST00000538622 572 ntTSL 56.23□□□□□ -1.413e-8■□□□□ 9.2
SND1Q7KZF4 PTPRC-210ENST00000462363 926 ntTSL 1 (best)6.01□□□□□ -1.452e-7■□□□□ 9.2
SND1Q7KZF4 TMX2-209ENST00000533602 560 ntTSL 35.9□□□□□ -1.466e-6■□□□□ 9.2
SND1Q7KZF4 BTF3-203ENST00000507081 377 ntTSL 55.89□□□□□ -1.471e-9■□□□□ 9.2
SND1Q7KZF4 PTPRC-205ENST00000391970 408 ntTSL 1 (best)5.55□□□□□ -1.522e-7■□□□□ 9.2
SND1Q7KZF4 SNRNP40-206ENST00000489853 1928 ntTSL 25.52□□□□□ -1.536e-6■□□□□ 9.2
SND1Q7KZF4 PTPRC-207ENST00000418674 462 ntTSL 25.07□□□□□ -1.62e-7■□□□□ 9.2
SND1Q7KZF4 OCIAD1-208ENST00000504654 552 ntTSL 34.98□□□□□ -1.617e-7■□□□□ 9.2
SND1Q7KZF4 PTPRC-208ENST00000427110 264 ntTSL 1 (best)4.27□□□□□ -1.732e-7■□□□□ 9.2
SND1Q7KZF4 ITIH3-205ENST00000465243 824 ntTSL 59.97□□□□□ -0.812e-12■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-202ENST00000464240 1830 ntTSL 219.66■□□□□ 0.743e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.75■□□□□ 0.433e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.75■□□□□ 0.433e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.433e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.81■□□□□ 0.283e-6■□□□□ 9.2
SND1Q7KZF4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.96□□□□□ -0.013e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC13.64□□□□□ -0.233e-6■□□□□ 9.2
SND1Q7KZF4 ADH5-210ENST00000512621 1475 ntTSL 212.99□□□□□ -0.333e-6■□□□□ 9.2
SND1Q7KZF4 ADH5-211ENST00000512659 822 ntTSL 511.19□□□□□ -0.623e-6■□□□□ 9.2
SND1Q7KZF4 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.833e-6■□□□□ 9.2
SND1Q7KZF4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.48□□□□□ -1.213e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.032e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.9■□□□□ 0.142e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-201ENST00000367883 706 ntTSL 3 BASIC12.37□□□□□ -0.432e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-204ENST00000367888 778 ntTSL 3 BASIC12.37□□□□□ -0.432e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC12.29□□□□□ -0.442e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-212ENST00000495447 720 ntTSL 311.45□□□□□ -0.582e-6■□□□□ 9.2
SND1Q7KZF4 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.112e-6■□□□□ 9.2
SND1Q7KZF4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.52e-12■□□□□ 9.2
SND1Q7KZF4 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.392e-12■□□□□ 9.2
SND1Q7KZF4 CYCS-204ENST00000413447 498 ntTSL 312.63□□□□□ -0.392e-12■□□□□ 9.2
SND1Q7KZF4 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -12e-12■□□□□ 9.2
SND1Q7KZF4 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.041e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.11e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.111e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.491e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.16□□□□□ -1.261e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.411e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.72□□□□□ -1.491e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.67□□□□□ -1.51e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.55□□□□□ -1.521e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.74□□□□□ -1.651e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.661e-8■□□□□ 9.2
SND1Q7KZF4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.45□□□□□ -1.71e-8■□□□□ 9.2
SND1Q7KZF4 VAPA-204ENST00000577901 917 ntTSL 216.52■□□□□ 0.244e-15■□□□□ 9.2
SND1Q7KZF4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.88■□□□□ 0.134e-15■□□□□ 9.2
SND1Q7KZF4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.024e-15■□□□□ 9.2
SND1Q7KZF4 VAPA-207ENST00000583879 719 ntTSL 25.52□□□□□ -1.534e-15■□□□□ 9.2
SND1Q7KZF4 VAPA-208ENST00000584796 654 ntTSL 35.44□□□□□ -1.544e-15■□□□□ 9.2
SND1Q7KZF4 RPL41-201ENST00000358888 551 ntTSL 310.39□□□□□ -0.755e-23■□□□□ 9.2
SND1Q7KZF4 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.975e-23■□□□□ 9.2
SND1Q7KZF4 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.095e-23■□□□□ 9.2
SND1Q7KZF4 RPL41-203ENST00000546485 335 ntTSL 27.85□□□□□ -1.155e-23■□□□□ 9.2
SND1Q7KZF4 LAMA5-207ENST00000471042 487 ntTSL 214.73□□□□□ -0.052e-12■□□□□ 9.2
SND1Q7KZF4 ACTR3-204ENST00000446821 818 ntTSL 317.09■□□□□ 0.332e-6■□□□□ 9.2
SND1Q7KZF4 ACTR3-203ENST00000443297 566 ntTSL 413.73□□□□□ -0.212e-6■□□□□ 9.2
SND1Q7KZF4 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC12.07□□□□□ -0.482e-6■□□□□ 9.2
SND1Q7KZF4 ACTR3-207ENST00000489779 545 ntTSL 26.82□□□□□ -1.322e-6■□□□□ 9.2
SND1Q7KZF4 SLC38A10-206ENST00000540966 896 ntTSL 317.4■□□□□ 0.385e-15■□□□□ 9.2
SND1Q7KZF4 SLC38A10-211ENST00000576151 774 ntTSL 216.18■□□□□ 0.185e-15■□□□□ 9.2
SND1Q7KZF4 ALDOA-215ENST00000565355 538 ntTSL 516.06■□□□□ 0.163e-13■□□□□ 9.2
SND1Q7KZF4 SDF4-204ENST00000459994 604 ntTSL 516.05■□□□□ 0.166e-11■□□□□ 9.2
SND1Q7KZF4 SLC38A5-203ENST00000429543 656 ntTSL 515□□□□□ -0.011e-8■□□□□ 9.2
SND1Q7KZF4 SLC38A5-207ENST00000488083 622 ntTSL 314.57□□□□□ -0.081e-8■□□□□ 9.2
SND1Q7KZF4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.52■■□□□ 1.191e-7■□□□□ 9.2
SND1Q7KZF4 SLC13A3-209ENST00000468915 1597 ntTSL 515.39■□□□□ 0.051e-7■□□□□ 9.2
SND1Q7KZF4 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.311e-7■□□□□ 9.2
SND1Q7KZF4 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC11.98□□□□□ -0.491e-7■□□□□ 9.2
SND1Q7KZF4 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC11.37□□□□□ -0.591e-7■□□□□ 9.2
SND1Q7KZF4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.17□□□□□ -1.11e-7■□□□□ 9.2
SND1Q7KZF4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.9■□□□□ 0.148e-6■□□□□ 9.2
SND1Q7KZF4 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.068e-6■□□□□ 9.2
SND1Q7KZF4 PRR11-203ENST00000578542 2334 ntTSL 513.52□□□□□ -0.258e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC12.93□□□□□ -0.348e-6■□□□□ 9.2
SND1Q7KZF4 SRP54-213ENST00000556994 2327 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.388e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC12.48□□□□□ -0.418e-6■□□□□ 9.2
SND1Q7KZF4 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.418e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-204ENST00000548281 554 ntTSL 412.13□□□□□ -0.478e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-202ENST00000455864 880 ntTSL 2 BASIC11.64□□□□□ -0.558e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-213ENST00000551962 578 ntTSL 511.64□□□□□ -0.558e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-214ENST00000552218 797 ntTSL 5 BASIC11.22□□□□□ -0.618e-6■□□□□ 9.2
SND1Q7KZF4 COPZ1-201ENST00000262061 1897 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.668e-6■□□□□ 9.2
Retrieved 100 of 13,567 protein–RNA pairs in 372.7 ms