Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC105020.1-201ENST00000435356 2205 ntBASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 DOC2GP-204ENST00000639052 2548 ntBASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 AC116351.2-201ENST00000606540 1585 ntBASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 INGX-201ENST00000359239 846 ntBASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 YBX1P10-201ENST00000444752 975 ntBASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXR1Q6PIV2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CROCCP2-202ENST00000412962 2773 ntBASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 AC004980.1-204ENST00000429707 299 ntBASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 AP005242.2-201ENST00000580065 1175 ntBASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 DGCR10-201ENST00000609839 495 ntBASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXR1Q6PIV2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
FOXR1Q6PIV2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXR1Q6PIV2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms